LOCUS R6Kamp_LAP_Dronp 4194 bp ss-DNA circular SYN 17-APR-2008 DEFINITION - ACCESSION - KEYWORDS - SOURCE - COMMENT ApEinfo:methylated:0 FEATURES Location/Qualifiers rep_origin 34..414 /label=R6K ori (pirate) /note=ApEinfo_fwdcolor=#006868 /note=ApEinfo_revcolor=#006868 promoter 544..579 /label=Bact.prom. from pEGFP-N3 /note=ApEinfo_fwdcolor=cyan /note=ApEinfo_revcolor=green CDS 812..1471 /label=AmpR /note=ApEinfo_fwdcolor=yellow /note=ApEinfo_revcolor=yellow misc_structure 1565..1585 /label=TEV-site /note=ApEinfo_fwdcolor=cyan /note=ApEinfo_revcolor=cyan protein_bind 1598..1642 /label=S-peptide /note=ApEinfo_fwdcolor=#00ffff /note=ApEinfo_revcolor=#00ffff misc_feature 1676..1711 /label=PreScission /note=ApEinfo_fwdcolor=cyan /note=ApEinfo_revcolor=cyan misc_feature 1682..1705 /label=PreScission(1) /note=ApEinfo_label=PreScission /note=ApEinfo_fwdcolor=#717dff /note=ApEinfo_revcolor=#717dff misc_feature 1733..2407 /label=Dronpa /note=ApEinfo_fwdcolor=#ff686b /note=ApEinfo_revcolor=#ff686b misc_feature join(2432..2442,2447..3018) /label=IRES(mut) /note=ApEinfo_fwdcolor=#ffc03c /note=ApEinfo_revcolor=#ffc03c promoter 3032..3112 /label=gb3-prom /note=ApEinfo_fwdcolor=#ff42ce /note=ApEinfo_revcolor=#ff42ce CDS 3125..3916 /label=Kan /note=neoR /note=ApEinfo_fwdcolor=yellow /note=ApEinfo_revcolor=yellow BASE COUNT 1071 A 1018 C 1099 G 1006 T 0 OTHER ORIGIN ? 1 CGGCCACGAT GCGTCCGGCG TAGAGGATCT GAAGATCAGC AGTTCAACCT GTTGATAGTA 61 CGTACTAAGC TCTCATGTTT CACGTACTAA GCTCTCATGT TTAACGTACT AAGCTCTCAT 121 GTTTAACGAA CTAAACCCTC ATGGCTAACG TACTAAGCTC TCATGGCTAA CGTACTAAGC 181 TCTCATGTTT CACGTACTAA GCTCTCATGT TTGAACAATA AAATTAATAT AAATCAGCAA 241 CTTAAATAGC CTCTAAGGTT TTAAGTTTTA TAAGAAAAAA AAGAATATAT AAGGCTTTTA 301 AAGCTTTTAA GGTTTAACGG TTGTGGACAA CAAGCCAGGG ATGTAACGCA CTGAGAAGCC 361 CTTAGAGCCT CTCAAAGCAA TTTTGAGTGA CACAGGAACA CTTAACGGCT GACATGGGAA 421 TTAGCTTCAC GCTGCCGCAA GCACTCAGGG CGCAAGGGCT GCTAAAGGAA GCGGATAGAC 481 GTCAGGTGGC ACTTTTCGGG GAAATGTGCG CGGAACCCCT ATTTGTTTAT TTTTCTAAAT 541 ACATTCAAAT ATGTATCCGC TCATGAGACA ATAACCCTGA TAAATGCTTC AATAATATTG 601 AAAAAGGAAG AGTATGAGTA TTCAACATTT CCGTGTCGCC CTTATTCCCT TTTTTGCGGC 661 ATTTTGCCTT CCTGTTTTTG CTCACCCAGA AACGCTGGTG AAAGTAAAAG ATGCTGAAGA 721 TCAGTTGGGT GCACGAGTGG GTTACATCGA ACTGGATCTC AACAGCGGTA AGATCCTTGA 781 GAGTTTTCGC CCCGAAGAAC GTTTTCCAAT GATGAGCACT TTTAAAGTTC TGCTATGTGG 841 CGCGGTATTA TCCCGTGTTG ACGCCGGGCA AGAGCAACTC GGTCGCCGCA TACACTATTC 901 TCAGAATGAC TTGGTTGAGT ACTCACCAGT CACAGAAAAG CATCTTACGG ATGGCATGAC 961 AGTAAGAGAA TTATGCAGTG CTGCCATAAC CATGAGTGAT AACACTGCGG CCAACTTACT 1021 TCTGACAACG ATCGGAGGAC CGAAGGAGCT AACCGCTTTT TTGCACAACA TGGGGGATCA 1081 TGTAACTCGC CTTGATCGTT GGGAACCGGA GCTGAATGAA GCCATACCAA ACGACGAGCG 1141 TGACACCACG ATGCCTGCAG CAATGGCAAC AACGTTGCGC AAACTATTAA CTGGCGAACT 1201 ACTTACTCTA GCTTCCCGGC AACAATTAAT AGACTGGATG GAGGCGGATA AAGTTGCAGG 1261 ACCACTTCTG CGCTCGGCCC TTCCGGCTGG CTGGTTTATT GCTGATAAAT CTGGAGCCGG 1321 TGAGCGTGGG TCTCGCGGTA TCATTGCAGC ACTGGGGCCA GATGGTAAGC CCTCCCGTAT 1381 CGTAGTTATC TACACGACGG GGAGTCAGGC AACTATGGAT GAACGAAATA GACAGATCGC 1441 TGAGATAGGT GCCTCACTGA TTAAGCATTG GTAACCCAGC CCGCCTAATG AGCGGGCTTT 1501 TTTTTGAACA AAAGGCTGCA GCTGGACTTC TAGAGCTGAT TATGATATTC CAACTACTGC 1561 AAGCGAGAAT CTTTATTTTC AGGGCGCCGC CAAATTCAAA GAAACCGCTG CTGCTAAATT 1621 CGAACGCCAG CACATGGACA GCGGAGGTGG AGGTTCGAGC GGTCCCTCGG GTTCGTCGAG 1681 CCTGGAAGTT CTGTTCCAGG GGCCCCTGTC GTCGAGCGGT CCCTCGGGTT CGATGAGTGT 1741 GATTAAACCA GACATGAAGA TCAAGCTGCG TATGGAAGGC GCTGTAAATG GACACCCGTT 1801 CGCGATTGAA GGAGTTGGCC TTGGGAAGCC TTTCGAGGGA AAACAGAGTA TGGACCTTAA 1861 AGTCAAAGAA GGCGGACCTC TGCCTTTCGC CTATGACATC TTGACAACTG TGTTCTGTTA 1921 CGGCAACAGG GTATTCGCCA AATACCCAGA AAATATAGTA GACTATTTCA AGCAGTCGTT 1981 TCCTGAGGGC TACTCTTGGG AACGAAGCAT GAATTACGAA GACGGGGGCA TTTGTAACGC 2041 GACAAACGAC ATAACCCTGG ATGGTGACTG TTATATCTAT GAAATTCGAT TTGATGGTGT 2101 GAACTTTCCT GCCAATGGTC CAGTTATGCA GAAGAGGACT GTGAAATGGG AGCCATCCAC 2161 TGAGAAATTG TATGTGCGTG ATGGAGTGCT GAAGGGTGAT GTTAACATGG CTCTGTCGCT 2221 TGAAGGAGGT GGCCATTACC GATGTGACTT CAAAACTACT TATAAAGCTA AGAAGGTTGT 2281 CCAGTTGCCA GACTATCACT TTGTGGACCA CCACATTGAG ATTAAAAGCC ACGACAAAGA 2341 TTACAGTAAT GTTAATCTGC ATGAGCATGC CGAAGCGCAT TCTGAGCTGC CGAGGCAGGC 2401 CAAGTAATGA TCTAGAGTCG AGTTAATTAA GAATTCCGCC CCCCCCCCTC TCCCTCCCCC 2461 CCCCCTAACG TTACTGGCCG AAGCCGCTTG GAATAAGGCC GGTGTGCGTT TGTCTATATG 2521 TTATTTTCCA CCATATTGCC GTCTTTTGGC AATGTGAGGG CCCGGAAACC TGGCCCTGTC 2581 TTCTTGACGA GCATTCCTAG GGGTCTTTCC CCTCTCGCCA AAGGAATGCA GGGTCTGTTG 2641 AATGTCGTGA AGGAAGCAGT TCCTCTGGAA GCTTCTTGAA GACAAACAAC GTCTGTAGCG 2701 ACCCTTTGCA GGCAGCGGAA CCCCCCACCT GGCGACAGGT GCCTCTGCGG CCAAAAGCCA 2761 CGTGTATAAG ATACACCTGC AAAGGCGGCA CAACCCCAGT GCCACGTTGT GAGTTGGATA 2821 GTTGTGGAAA GAGTCAAATG GCTCTCCTCA AGCGTATTCA ACAAGGGGCT GAAGGATGCC 2881 CAGAAGGTAC CCCATTGTAT GGGATCTGAT CTGGGGCCTC GGTGCACATG CTTTACATGT 2941 GTTTAGTCGA GGTTAAAAAA ACGTCTAGGC CCCCCGAACC ACGGGGACGT GGTTTTCCTT 3001 TGAAAAACAC GATGATAATA TGGCCACAAC CTGTTACATT GCACAAGATA AAAATATATC 3061 ATCACGAACA GTAAAACTGT CTGCTTACAT AAACAGTAAT ACAAGGGGTG TTATGGGATC 3121 GGCCATTGAA CAAGATGGAT TGCACGCAGG TTCTCCGGCC GCTTGGGTGG AGAGGCTATT 3181 CGGCTATGAC TGGGCACAAC AGACAATCGG CTGCTCTGAT GCCGCCGTGT TCCGGCTGTC 3241 AGCGCAGGGG CGCCCGGTTC TTTTTGTCAA GACCGACCTG TCCGGTGCCC TGAATGAACT 3301 GCAGGACGAG GCAGCGCGGC TATCGTGGCT GGCCACGACG GGCGTTCCTT GCGCAGCTGT 3361 GCTCGACGTT GTCACTGAAG CGGGAAGGGA CTGGCTGCTA TTGGGCGAAG TGCCGGGGCA 3421 GGATCTCCTG TCATCTCACC TTGCTCCTGC CGAGAAAGTA TCCATCATGG CTGATGCAAT 3481 GCGGCGGCTG CATACGCTTG ATCCGGCTAC CTGCCCATTC GACCACCAAG CGAAACATCG 3541 CATCGAGCGA GCACGTACTC GGATGGAAGC CGGTCTTGTC GATCAGGATG ATCTGGACGA 3601 AGAGCATCAG GGGCTCGCGC CAGCCGAACT GTTCGCCAGG CTCAAGGCGC GCATGCCCGA 3661 CGGCGAGGAT CTCGTCGTGA CCCATGGCGA TGCCTGCTTG CCGAATATCA TGGTGGAAAA 3721 TGGCCGCTTT TCTGGATTCA TCGACTGTGG CCGGCTGGGT GTGGCGGACC GCTATCAGGA 3781 CATAGCGTTG GCTACCCGTG ATATTGCTGA AGAGCTTGGC GGCGAATGGG CTGACCGCTT 3841 CCTCGTGCTT TACGGTATCG CCGCTCCCGA TTCGCAGCGC ATCGCCTTCT ATCGCCTTCT 3901 TGACGAGTTC TTCTGACTCG AGTTGCCCTC ATCTGTTACG CCGGCGGTAG CCGGCCAGCC 3961 TCGCAGAGCA GGATTCCCGT TGAGCACCGC CAGGTGCGAA TAAGGGACAG TGAAGAAGGA 4021 ACACCCGCTC GCGGGTGGGC CTACTTCACC TATCCTGCCC GGCTGACGCC GTTGGATACA 4081 CCAAGGAAAG TCTACACGAA CCCTTTGGCA AAATCCTGTA TATCGTGCGA AAAAGGATGG 4141 ATATACCGAA AAAATCGCTA TAATGACCCC GAAGCAGGGT TATGCAGCGG AAAA //